FFCP PHASE1:Hg19::chr1:152572708..152572714,+
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| Short description: | p1@LCE3C |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_LCE3C_5end |
| Coexpression cluster: | C441_keratoacanthoma_skin_tongue_esophagus_cervical_salivary_Sebocyte |
| Association with transcript: | -423bp_to_ENST00000333881, NM_178434, uc001fac.2_5end |
| EntrezGene: | LCE3C |
| HGNC: | 16612 |
| UniProt: | Q5T5A8 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p1@LCE3C |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| keratinocyte | 1.70e-32 | 5 |
| stratified squamous epithelial cell | 2.72e-27 | 6 |
| keratin accumulating cell | 2.72e-27 | 6 |
| stratified epithelial cell | 2.72e-27 | 6 |
| keratinizing barrier epithelial cell | 2.72e-27 | 6 |
| epithelial fate stem cell | 2.72e-27 | 6 |
| stratified epithelial stem cell | 2.72e-27 | 6 |
| surface ectodermal cell | 2.72e-27 | 6 |
| epidermal cell | 1.35e-18 | 9 |
| general ecto-epithelial cell | 2.37e-12 | 14 |
Showing 1 to 10 of 10 entries
| Ontology term | p-value | n |
|---|---|---|
| tongue | 2.09e-14 | 3 |
| gustatory system | 2.09e-14 | 3 |
| future tongue | 2.09e-14 | 3 |
| skin epidermis | 1.34e-11 | 15 |
| outer epithelium | 1.34e-11 | 15 |
| enveloping layer of ectoderm | 1.34e-11 | 15 |
| zone of skin | 2.53e-11 | 4 |
| skin of body | 1.56e-09 | 41 |
| integument | 1.40e-08 | 46 |
| integumental system | 1.40e-08 | 46 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| skin squamous cell carcinoma | 6.62e-41 | 1 |
| keratoacanthoma | 6.62e-41 | 1 |
| skin carcinoma | 3.11e-21 | 2 |
| skin cancer | 3.11e-21 | 2 |
| integumentary system cancer | 3.11e-21 | 2 |
| cervical cancer | 2.97e-09 | 5 |
Showing 1 to 6 of 6 entries
